Website stats for Pdbbind - pdbbind.org.cn
Download this statement In the past, we have received a number of queries about the status of the PDBbind core set. We also noticed that there are some confusions in literature regarding the naming convention of the CASF benchmark developed by our group. Here, we would like to make a formal statement about the PDBbind core set and the CASF benchmark in a hope to answer those queries and als...
It has a alexa rank of #5,364,418 in the world. It is a domain having .org.cn extension. It is estimated worth of $ 240.00 and have a daily income of around $ 1.00. As no active threats were reported recently, pdbbind.org.cn is SAFE to browse.
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| Alexa Rank: | 5,364,418 |
| PageSpeed Score: | 89 ON 100 |
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Web Server Information
Hosted IP Address:
202.127.145.150
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CN
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121.458Search Engine Results For pdbbind.org.cn
Welcome to PDBbind-CN database
The aim of the PDBbind database is to provide a comprehensive collection of the experimentally ... Welcome to the PDBbind-CN Database! ... from the PDBbind- CN web site under...
download - PDBBind
The aim of the PDBbind database is to provide a comprehensive collection of the experimentally measured binding affinity data for all types of biomolecular ...
Welcome to PDBbind-CN Database
3 Mar 2018 ... The aim of the PDBbind database is to provide a comprehensive collection of ... on the PDBbind-CN web server at http://www.pdbbind-cn.org/.
Welcome to the PDBbind-CN Database!
The PDBbind version 2017 is available on the PDBbind-CN web server at http:// www.pdbbind-cn.org/. The basic information of each complex, including binding ...
PDBbind database - Wikipedia
The PDBbind database is a comprehensive collection of experimentally measured binding ... The database is now publicly accessible at the PDBbind-CN site at...
Team Members of the PDBbind-CN Database
The aim of the PDBbind database is to provide a comprehensive collection of the experimentally measured binding affinity data for all types of biomolecular ...
PDB-wide collection of binding data: current status of the PDBbind ...
9 Oct 2014 ... Availability and implementation: All contents of this database are freely accessible at the PDBbind-CN Web server at http://www.pdbbind-cn.org/ .
Distribution of binding data in the PDBbind version 2013: ( A ...
The PDBbind database is now accessible at the PDBbind-CN Web server ( and . pdbbind.org.cn/). Users can browse, analyze and search the contents of ...
The PDBbind Database: Methodologies and Updates | Request PDF
24 Oct 2020 ... Request PDF | The PDBbind Database: Methodologies and Updates | We ... into the PDBbind database accessible on-line at http:// www.pdbbind.org/. ... Databases...
A New Scoring Function for Molecular Docking Based on AutoDock ...
It was trained on 2,412 protein-ligand complexes from the PDBbind database ( www.pdbbind.org.cn, version 2012) and validated on a set of 313 complexes ...
Representability of algebraic topology for biomolecules in ... - PLoS
8 Jan 2018 ... tein-ligand complexes from the PDBBind database and 128,374 ... datasets can be found at "http://www.pdbbind.org. cn/". The S1322 set which ...
Software developed by CCBG Group - SIOC-CCBG group
X-ToolBox consists of some tool programs, e.g. predicting protonation status, fix PDB file of protein, fix Mol2 and SDF file of small ligand. http://www.pdbbind-cn. org ...
Machine‐learning scoring functions for structure‐based drug lead ...
5 Feb 2020 ... CASF‐200723 CASF‐201324 CASF‐201625, PDB, BAP, http://www.pdbbind‐cn. org/casf.asp. D3R GC 201526 D3R GC 227 D3R GC 328 ...
Machine Learning on Small Biochemical Datasets ... - CS229
PDBBind (http://www.pdbbind.org.cn/) is an expertly curated database of experimentally measured binding affinities from biomolecular complexes published to ...
Protein Structure - an overview | ScienceDirect Topics
PDBBind, www.pdbbind.org, University of Michigan. PDBBind-CN, www.pdbbind. org.cn, Shanghai Institute of Organic Chemistry. PDBj (Protein Data Bank ...
Prodigy - Prodigy_bp.dataset - haddock
... and the PRODIGY-LIG predictions have been reported for 124 cases with known experimental Ki in the PDBbind dataset (http://www.pdbbind.org.cn/).
HongjianLi/RF-Score: A machine learning approach to ... - GitHub
It requires PDBbind and MGLTools as prerequisites. curl -O http://pdbbind.org.cn/ download/pdbbind_v2012.tar.gz tar zxf pdbbind_v2012.tar.gz curl -O ...
PELIKAN : ZBH : Universität Hamburg
30 May 2018 ... PDB bind version 2014, core set (obtained from http://www.pdbbind-cn.org/) [6]. Download here (~285 MB). HIV targets (structures of reverse ...
Structural and Sequence Similarity Makes a Significant ... - Yang Lab
30 Mar 2017 ... PDBbind, there are 1300 protein−ligand complexes with high- resolution ... 4119 . (27) CASF-2007 Data. http://www.pdbbind.org.cn/download/.
Gypsum-DL: an open-source program for preparing small-molecule ...
24 May 2019 ... We use 4463 high-quality protein–ligand complexes from the PDBBind database (http://www.pdbbind.org.cn/) [13, 14] to show that Gypsum-DL ...
Page Resources Breakdown
Homepage Links Analysis
Website Inpage Analysis
| H1 Headings: | Not Applicable | H2 Headings: | Not Applicable |
| H3 Headings: | Not Applicable | H4 Headings: | Not Applicable |
| H5 Headings: | Not Applicable | H6 Headings: | Not Applicable |
| Total IFRAMEs: | Not Applicable | Total Images: | 12 |
| Google Adsense: | Not Applicable | Google Analytics: | Not Applicable |
Two Phrase Analysis
| Words | Occurrences | Density | Possible Spam |
|---|---|---|---|
| the PDBbind | 20 | 1.148 % | No |
| of the | 16 | 0.918 % | No |
| CASF benchmark | 15 | 0.861 % | No |
| PDBbind database | 13 | 0.746 % | No |
| The PDBbind | 12 | 0.689 % | No |
| core set | 11 | 0.631 % | No |
| PDBbind core | 10 | 0.574 % | No |
| the CASF | 10 | 0.574 % | No |
| refined set | 8 | 0.459 % | No |
| Chem Inf | 7 | 0.402 % | No |
| Inf Model | 7 | 0.402 % | No |
| to the | 7 | 0.402 % | No |
| on an | 7 | 0.402 % | No |
| PDBbind version | 7 | 0.402 % | No |
| J Chem | 7 | 0.402 % | No |
| Scoring Functions | 6 | 0.344 % | No |
| test set | 6 | 0.344 % | No |
| we have | 6 | 0.344 % | No |
| as the | 6 | 0.344 % | No |
| set is | 6 | 0.344 % | No |
Four Phrase Analysis
| Words | Occurrences | Density | Possible Spam |
|---|---|---|---|
| the PDBbind core set | 9 | 0.517 % | No |
| J Chem Inf Model | 7 | 0.402 % | No |
| of the CASF benchmark | 5 | 0.287 % | No |
| Chem Inf Model 2014 | 4 | 0.23 % | No |
| updated on an annual | 4 | 0.23 % | No |
| on an annual basis | 4 | 0.23 % | No |
| Comparative Assessment of Scoring | 4 | 0.23 % | No |
| Inf Model 2014 54 | 4 | 0.23 % | No |
| Assessment of Scoring Functions | 4 | 0.23 % | No |
| The PDBbind database is | 3 | 0.172 % | No |
| of the PDBbind core | 3 | 0.172 % | No |
| PDBbind core set is | 3 | 0.172 % | No |
| of the PDBbind database | 3 | 0.172 % | No |
| Functions on an Updated | 2 | 0.115 % | No |
| of proteinligand complexes as | 2 | 0.115 % | No |
| proteinligand complexes as the | 2 | 0.115 % | No |
| measured binding affinity data | 2 | 0.115 % | No |
| on an Updated Benchmark | 2 | 0.115 % | No |
| 2014 54 6 pp | 2 | 0.115 % | No |
| binding affinity data for | 2 | 0.115 % | No |
HTTP Header Analysis
Status-Code: 200
Status: 200 OK
Cache-Control: no-store, no-cache, must-revalidate, post-check=0, pre-check=0
Pragma: no-cache
Content-Type: text/html; charset=UTF-8
Content-Encoding: gzip
Expires: Thu, 19 Nov 1981 08:52:00 GMT
Vary: Accept-Encoding
Server: Microsoft-IIS/8.0
X-Powered-By: ASP.NET
Date: Sun, 20 Dec 2020 10:01:58 GMT
Content-Length: 14336
Domain Information
| Domain Registrar: |
China NIC
|
|---|
Domain Nameserver Information
| Host | IP Address | Country | |
|---|---|---|---|
| ns.zknic.cn | |
159.226.128.1 | China |
| ns2.zknic.cn | |
159.226.128.8 | China |
DNS Record Analysis
| Host | Type | TTL | Extra |
|---|---|---|---|
| pdbbind.org.cn | A | 3574 |
IP: 202.127.145.150 |
| pdbbind.org.cn | NS | 3600 |
Target: server.shcnc.ac.cn |
| pdbbind.org.cn | SOA | 3600 |
MNAME: ns.zknic.cn RNAME: root.server.shcnc.ac.cn Serial: 2007102403 Refresh: 10800 Retry: 36000 Expire: 3600000 |
| pdbbind.org.cn | MX | 3600 |
Priority: 10 Target: mx.cstnet.cn |
Full WHOIS Lookup
ROID:
20071025s10051s08627116-cn
Domain Status: ok
Registrant:
中科院上海有机化学研究所
Registrant Contact Email:
[email protected]
Sponsoring Registrar:
北京新网数码信息技术有限公司
Name Server: ns.zknic.cn
Name Server:
ns2.zknic.cn
Registration Time: 2007-10-25 08:50:01
Expiration
Time: 2023-10-25 08:50:01
DNSSEC: unsigned
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